Nucleic acid biosensor system for point-of-care diagnostics

This technology is a transposition-based system for rapidly detecting target nucleic acid sequences that can be used for infectious diseases.

Unmet Need: Simple, rapid detection system of specific nucleic acid sequences

Current in vitro diagnostics for infectious diseases are time-consuming and costly, requiring centralized laboratories. While point-of-contact technologies improve accessibility, many approaches sacrifice sensitivity or require additional amplification steps and complex workflow. Nucleic-acid biosensors have emerged as promising point-of-care diagnostics; however, many remain limited by insufficient sensitivity, challenges with complex clinical samples and lack of availability for many major pathogens. Therefore, there is a need for simple, sensitive and rapidly adaptable diagnostic platforms capable of detecting diverse pathogens outside traditional laboratory environments.

The Technology: Transposition-based detection system for single-stranded RNA and double stranded DNA molecules

This technology is a programmable nucleic acid detection platform that uses a CRISPR RNA-guided Cas-transposase system to detect specific single-stranded RNA and double-stranded DNA sequences. The Fluid Enzymatic/Electronic Transposon-Based (FET) detector uses targeted transposition events to identify nucleic acid sequences and can be integrated with point-of-need FET Strip or an instrument-operated FET Multiplexor. Combined with colorimetric lateral flow assays or single-molecule field-effect transistors, this platform enables rapid and adaptable detection of targeted pathogens in diverse settings.

A prototype has been tested with adenovirus dsDNA and influenza ssRNA targets.

Applications:

  • Point-of-care diagnostics for infectious diseases and pathogens
  • Laboratory-based nucleic acid diagnostics
  • Cancer-associated nucleic acid diagnostics
  • Environmental biosurvelliance and monitoring
  • Agriculture pathogen monitoring
  • Public health and biosafety surveillance
  • Sensitive contamination testing

Advantages:

  • Increases sensitivity of nucleic acid detection
  • Enables cost-effective detection workflows
  • Provides rapid diagnostic results
  • Detects both single-stranded RNA and double-stranded DNA molecules
  • Rapidly adaptable for detection of emerging pathogens

Lead Inventor:

Samuel Sternberg, Ph.D.

Patent Information:

Patent Pending (US 20230059683)

Related Publications:

Tech Ventures Reference:

Quick Facts:
Tags
AcidAdenoviridaeBiosafetyCRISPRColorimetryNucleic acidPathogenPublic healthWorkflow
Inventors
Harris WangKenneth ShepardSamuel H. SternbergSamuel Sia Ph.D.Siddarth ArumugamXuebing Wu
Manager
Cynthia Lang
Departments
Biochemistry & Molecular BiophysicsBiomedical EngineeringElectrical EngineeringSystems Biology
Divisions
Columbia University Medical Center (CUMC)Fu Foundation School of Engineering and Applied Science (SEAS)
Reference Number
CU20204
Release Date
2026-06-26